Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.48■□□□□ 0.23
Capn1O35350 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Capn1O35350 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Capn1O35350 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.47■□□□□ 0.23
Capn1O35350 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.47■□□□□ 0.23
Capn1O35350 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Gm11927-201ENSMUST00000118472 759 ntBASIC16.47■□□□□ 0.23
Capn1O35350 Gm15378-201ENSMUST00000121894 207 ntBASIC16.47■□□□□ 0.23
Capn1O35350 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.47■□□□□ 0.23
Capn1O35350 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.47■□□□□ 0.23
Capn1O35350 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Capn1O35350 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.46■□□□□ 0.23
Capn1O35350 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Capn1O35350 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Capn1O35350 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.46■□□□□ 0.23
Capn1O35350 Gm715-201ENSMUST00000117865 831 ntBASIC16.46■□□□□ 0.23
Capn1O35350 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.46■□□□□ 0.23
Capn1O35350 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.46■□□□□ 0.23
Capn1O35350 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.46■□□□□ 0.23
Capn1O35350 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.46■□□□□ 0.23
Capn1O35350 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Capn1O35350 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Capn1O35350 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Capn1O35350 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Capn1O35350 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Capn1O35350 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Capn1O35350 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.45■□□□□ 0.22
Capn1O35350 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.45■□□□□ 0.22
Capn1O35350 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.45■□□□□ 0.22
Capn1O35350 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Flg-201ENSMUST00000050758 1488 ntBASIC16.45■□□□□ 0.22
Capn1O35350 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Capn1O35350 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Capn1O35350 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Capn1O35350 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Capn1O35350 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.44■□□□□ 0.22
Capn1O35350 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.44■□□□□ 0.22
Capn1O35350 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.44■□□□□ 0.22
Capn1O35350 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.44■□□□□ 0.22
Capn1O35350 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Capn1O35350 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.43■□□□□ 0.22
Capn1O35350 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.43■□□□□ 0.22
Capn1O35350 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Capn1O35350 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Capn1O35350 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Capn1O35350 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms