Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11aO35305 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Gm15375-201ENSMUST00000119510 849 ntBASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11aO35305 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Gm20760-201ENSMUST00000179197 648 ntBASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf11aO35305 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf11aO35305 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Gm10698-201ENSMUST00000182663 604 ntBASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tnfrsf11aO35305 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Gm13401-201ENSMUST00000117074 291 ntBASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf11aO35305 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Gm13168-201ENSMUST00000121771 632 ntBASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Mir6349-201ENSMUST00000184059 97 ntBASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Gm42545-201ENSMUST00000202755 922 ntBASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf11aO35305 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms