Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac1O09106 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.24■□□□□ 0.99
Hdac1O09106 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac1O09106 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.23■□□□□ 0.99
Hdac1O09106 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.23■□□□□ 0.99
Hdac1O09106 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.23■□□□□ 0.99
Hdac1O09106 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac1O09106 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Hdac1O09106 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Hdac1O09106 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.22■□□□□ 0.99
Hdac1O09106 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.22■□□□□ 0.99
Hdac1O09106 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.22■□□□□ 0.99
Hdac1O09106 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Hdac1O09106 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac1O09106 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hdac1O09106 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.21■□□□□ 0.99
Hdac1O09106 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.21■□□□□ 0.99
Hdac1O09106 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.21■□□□□ 0.99
Hdac1O09106 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.21■□□□□ 0.99
Hdac1O09106 Gm7514-201ENSMUST00000209475 934 ntBASIC21.21■□□□□ 0.99
Hdac1O09106 Gm10033-202ENSMUST00000211874 928 ntBASIC21.21■□□□□ 0.99
Hdac1O09106 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.21■□□□□ 0.99
Hdac1O09106 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.21■□□□□ 0.99
Hdac1O09106 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Hdac1O09106 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac1O09106 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Hdac1O09106 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hdac1O09106 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hdac1O09106 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac1O09106 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac1O09106 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Hdac1O09106 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Hdac1O09106 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac1O09106 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac1O09106 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac1O09106 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hdac1O09106 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Hdac1O09106 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Mir8112-201ENSMUST00000184382 131 ntBASIC21.19■□□□□ 0.98
Hdac1O09106 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Hdac1O09106 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hdac1O09106 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Hdac1O09106 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Hdac1O09106 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac1O09106 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.18■□□□□ 0.98
Hdac1O09106 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.18■□□□□ 0.98
Hdac1O09106 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Hdac1O09106 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac1O09106 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac1O09106 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.18■□□□□ 0.98
Hdac1O09106 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac1O09106 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac1O09106 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.18■□□□□ 0.98
Hdac1O09106 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hdac1O09106 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac1O09106 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac1O09106 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Hdac1O09106 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms