Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm38205-201ENSMUST00000192243 258 ntBASIC18.29■□□□□ 0.52
Trove2O08848 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trove2O08848 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trove2O08848 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trove2O08848 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trove2O08848 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.28■□□□□ 0.52
Trove2O08848 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Trove2O08848 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trove2O08848 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.28■□□□□ 0.52
Trove2O08848 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Trove2O08848 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trove2O08848 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.27■□□□□ 0.52
Trove2O08848 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.27■□□□□ 0.52
Trove2O08848 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trove2O08848 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trove2O08848 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trove2O08848 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trove2O08848 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.26■□□□□ 0.51
Trove2O08848 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.26■□□□□ 0.51
Trove2O08848 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trove2O08848 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trove2O08848 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.25■□□□□ 0.51
Trove2O08848 Gm8969-201ENSMUST00000199694 526 ntBASIC18.25■□□□□ 0.51
Trove2O08848 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trove2O08848 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.25■□□□□ 0.51
Trove2O08848 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trove2O08848 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trove2O08848 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trove2O08848 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trove2O08848 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trove2O08848 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.24■□□□□ 0.51
Trove2O08848 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.24■□□□□ 0.51
Trove2O08848 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trove2O08848 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trove2O08848 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trove2O08848 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trove2O08848 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trove2O08848 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms