Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.25■□□□□ 0.51
Ercc2O08811 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ercc2O08811 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ercc2O08811 Mir2861-201ENSMUST00000175539 82 ntBASIC18.24■□□□□ 0.51
Ercc2O08811 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.24■□□□□ 0.51
Ercc2O08811 Gm10138-203ENSMUST00000206952 366 ntBASIC18.24■□□□□ 0.51
Ercc2O08811 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.24■□□□□ 0.51
Ercc2O08811 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ercc2O08811 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ercc2O08811 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.23■□□□□ 0.51
Ercc2O08811 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Gm13158-201ENSMUST00000122007 736 ntBASIC18.23■□□□□ 0.51
Ercc2O08811 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.23■□□□□ 0.51
Ercc2O08811 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.23■□□□□ 0.51
Ercc2O08811 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ercc2O08811 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ercc2O08811 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Gm10653-202ENSMUST00000139570 835 ntBASIC18.22■□□□□ 0.51
Ercc2O08811 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.22■□□□□ 0.51
Ercc2O08811 Idnk-204ENSMUST00000226010 1898 ntBASIC18.22■□□□□ 0.51
Ercc2O08811 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Ercc2O08811 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ercc2O08811 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.21■□□□□ 0.51
Ercc2O08811 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.21■□□□□ 0.51
Ercc2O08811 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ercc2O08811 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ercc2O08811 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ercc2O08811 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ercc2O08811 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Ercc2O08811 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.21■□□□□ 0.5
Ercc2O08811 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ercc2O08811 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ercc2O08811 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ercc2O08811 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ercc2O08811 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ercc2O08811 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ercc2O08811 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ercc2O08811 Gm15375-201ENSMUST00000119510 849 ntBASIC18.19■□□□□ 0.5
Ercc2O08811 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms