Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ClockO08785 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ClockO08785 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ClockO08785 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.93■□□□□ 0.3
ClockO08785 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ClockO08785 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
ClockO08785 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
ClockO08785 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.93■□□□□ 0.3
ClockO08785 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ClockO08785 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.93■□□□□ 0.3
ClockO08785 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ClockO08785 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ClockO08785 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
ClockO08785 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.92■□□□□ 0.3
ClockO08785 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.92■□□□□ 0.3
ClockO08785 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ClockO08785 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ClockO08785 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.91■□□□□ 0.3
ClockO08785 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.91■□□□□ 0.3
ClockO08785 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ClockO08785 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.91■□□□□ 0.3
ClockO08785 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ClockO08785 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ClockO08785 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ClockO08785 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClockO08785 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.9■□□□□ 0.3
ClockO08785 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ClockO08785 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.9■□□□□ 0.3
ClockO08785 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClockO08785 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ClockO08785 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
ClockO08785 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
ClockO08785 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.89■□□□□ 0.29
ClockO08785 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Gm12821-201ENSMUST00000120022 600 ntBASIC16.89■□□□□ 0.29
ClockO08785 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ClockO08785 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
ClockO08785 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ClockO08785 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClockO08785 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 154 ms