Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcof1O08784 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcof1O08784 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tcof1O08784 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tcof1O08784 Gm13836-201ENSMUST00000121159 501 ntBASIC20.86■□□□□ 0.93
Tcof1O08784 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tcof1O08784 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.86■□□□□ 0.93
Tcof1O08784 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Tcof1O08784 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tcof1O08784 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tcof1O08784 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tcof1O08784 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tcof1O08784 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcof1O08784 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.85■□□□□ 0.93
Tcof1O08784 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcof1O08784 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Tcof1O08784 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tcof1O08784 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.85■□□□□ 0.93
Tcof1O08784 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcof1O08784 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcof1O08784 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcof1O08784 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.85■□□□□ 0.93
Tcof1O08784 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tcof1O08784 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcof1O08784 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tcof1O08784 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcof1O08784 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcof1O08784 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tcof1O08784 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tcof1O08784 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tcof1O08784 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcof1O08784 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcof1O08784 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.83■□□□□ 0.92
Tcof1O08784 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tcof1O08784 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.83■□□□□ 0.92
Tcof1O08784 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tcof1O08784 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tcof1O08784 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.82■□□□□ 0.92
Tcof1O08784 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.82■□□□□ 0.92
Tcof1O08784 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Tcof1O08784 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Tcof1O08784 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tcof1O08784 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.82■□□□□ 0.92
Tcof1O08784 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Tcof1O08784 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tcof1O08784 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Tcof1O08784 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Tcof1O08784 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.82■□□□□ 0.92
Tcof1O08784 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.81■□□□□ 0.92
Tcof1O08784 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tcof1O08784 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Tcof1O08784 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.81■□□□□ 0.92
Tcof1O08784 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Tcof1O08784 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tcof1O08784 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tcof1O08784 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcof1O08784 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tcof1O08784 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tcof1O08784 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.8■□□□□ 0.92
Tcof1O08784 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.8■□□□□ 0.92
Tcof1O08784 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcof1O08784 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcof1O08784 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcof1O08784 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcof1O08784 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tcof1O08784 Gm12382-201ENSMUST00000122005 922 ntBASIC20.79■□□□□ 0.92
Tcof1O08784 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tcof1O08784 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.79■□□□□ 0.92
Tcof1O08784 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.79■□□□□ 0.92
Tcof1O08784 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.79■□□□□ 0.92
Tcof1O08784 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tcof1O08784 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tcof1O08784 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tcof1O08784 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tcof1O08784 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms