Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34bJ3QNR8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34bJ3QNR8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34bJ3QNR8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim34bJ3QNR8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34bJ3QNR8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34bJ3QNR8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Gm13401-201ENSMUST00000117074 291 ntBASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Gm29791-202ENSMUST00000207888 369 ntBASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34bJ3QNR8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34bJ3QNR8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms