Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13d-3J3QMG8 Idnk-204ENSMUST00000226010 1898 ntBASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Gm12441-201ENSMUST00000121806 588 ntBASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav13d-3J3QMG8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13d-3J3QMG8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13d-3J3QMG8 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Gm11249-201ENSMUST00000117071 859 ntBASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Gm29257-201ENSMUST00000186115 639 ntBASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Gm20049-201ENSMUST00000219950 730 ntBASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13d-3J3QMG8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13d-3J3QMG8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13d-3J3QMG8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms