Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nkx1-1G3UXB3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Mir770-201ENSMUST00000103252 94 ntBASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Gm14740-201ENSMUST00000118538 1150 ntBASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nkx1-1G3UXB3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm44387-201ENSMUST00000196298 145 ntBASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm10175-201ENSMUST00000086013 645 ntBASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.25■□□□□ 0.83
Nkx1-1G3UXB3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nkx1-1G3UXB3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Gm5364-201ENSMUST00000216789 889 ntBASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nkx1-1G3UXB3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.22■□□□□ 0.83
Nkx1-1G3UXB3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Gm26039-201ENSMUST00000158152 144 ntBASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms