Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm4974-201ENSMUST00000209974 875 ntBASIC8.67□□□□□ -1.02
Rnf213E9Q555 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Gm13401-201ENSMUST00000117074 291 ntBASIC8.67□□□□□ -1.02
Rnf213E9Q555 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Rnf213E9Q555 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rnf213E9Q555 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Gm5364-201ENSMUST00000216789 889 ntBASIC8.66□□□□□ -1.02
Rnf213E9Q555 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rnf213E9Q555 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC8.65□□□□□ -1.02
Rnf213E9Q555 Gm12350-201ENSMUST00000121208 462 ntBASIC8.65□□□□□ -1.02
Rnf213E9Q555 CT943659.1-201ENSMUST00000215459 326 ntBASIC8.65□□□□□ -1.02
Rnf213E9Q555 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Gm11779-201ENSMUST00000118541 368 ntBASIC8.65□□□□□ -1.02
Rnf213E9Q555 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Rnf213E9Q555 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.03
Rnf213E9Q555 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rnf213E9Q555 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Rnf213E9Q555 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 AC125350.1-201ENSMUST00000225115 903 ntBASIC8.64□□□□□ -1.03
Rnf213E9Q555 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC8.64□□□□□ -1.03
Rnf213E9Q555 AC138767.1-201ENSMUST00000222661 415 ntBASIC8.64□□□□□ -1.03
Rnf213E9Q555 AC225888.1-201ENSMUST00000227184 728 ntBASIC8.64□□□□□ -1.03
Rnf213E9Q555 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rnf213E9Q555 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC8.64□□□□□ -1.03
Rnf213E9Q555 AC126028.2-201ENSMUST00000228100 1833 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms