Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cdr1E9Q0B4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdr1E9Q0B4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cdr1E9Q0B4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.58■□□□□ 0.41
Cdr1E9Q0B4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cdr1E9Q0B4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdr1E9Q0B4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Cap2-205ENSMUST00000225824 1634 ntBASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdr1E9Q0B4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms