Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ift140E9PY46 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ift140E9PY46 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Ift140E9PY46 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Ift140E9PY46 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC28.35■■■□□ 2.13
Ift140E9PY46 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Ift140E9PY46 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ift140E9PY46 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ift140E9PY46 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ift140E9PY46 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ift140E9PY46 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Ift140E9PY46 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ift140E9PY46 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Ift140E9PY46 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ift140E9PY46 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ift140E9PY46 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ift140E9PY46 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ift140E9PY46 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Ift140E9PY46 Gm12895-201ENSMUST00000122214 226 ntBASIC28.33■■■□□ 2.13
Ift140E9PY46 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC28.33■■■□□ 2.13
Ift140E9PY46 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ift140E9PY46 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Ift140E9PY46 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC28.32■■■□□ 2.12
Ift140E9PY46 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC28.32■■■□□ 2.12
Ift140E9PY46 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC28.32■■■□□ 2.12
Ift140E9PY46 Gm29791-202ENSMUST00000207888 369 ntBASIC28.32■■■□□ 2.12
Ift140E9PY46 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ift140E9PY46 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ift140E9PY46 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ift140E9PY46 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
Ift140E9PY46 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC28.31■■■□□ 2.12
Ift140E9PY46 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC28.31■■■□□ 2.12
Ift140E9PY46 AC153889.1-201ENSMUST00000219257 330 ntBASIC28.31■■■□□ 2.12
Ift140E9PY46 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
Ift140E9PY46 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ift140E9PY46 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ift140E9PY46 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ift140E9PY46 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ift140E9PY46 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Ift140E9PY46 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC28.3■■■□□ 2.12
Ift140E9PY46 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ift140E9PY46 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ift140E9PY46 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC28.3■■■□□ 2.12
Ift140E9PY46 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ift140E9PY46 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC28.29■■■□□ 2.12
Ift140E9PY46 Gm18206-201ENSMUST00000207027 926 ntBASIC28.29■■■□□ 2.12
Ift140E9PY46 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 AC121961.1-201ENSMUST00000218594 1779 ntBASIC28.29■■■□□ 2.12
Ift140E9PY46 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ift140E9PY46 Gm45906-201ENSMUST00000208911 1430 ntBASIC28.28■■■□□ 2.12
Ift140E9PY46 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ift140E9PY46 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ift140E9PY46 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ift140E9PY46 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ift140E9PY46 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ift140E9PY46 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
Ift140E9PY46 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC28.28■■■□□ 2.12
Ift140E9PY46 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ift140E9PY46 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ift140E9PY46 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ift140E9PY46 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Ift140E9PY46 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Ift140E9PY46 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Ift140E9PY46 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ift140E9PY46 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Ift140E9PY46 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ift140E9PY46 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC28.26■■■□□ 2.11
Ift140E9PY46 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ift140E9PY46 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Ift140E9PY46 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Ift140E9PY46 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ift140E9PY46 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC28.26■■■□□ 2.11
Ift140E9PY46 Rncr4-201ENSMUST00000194541 2234 ntBASIC28.25■■■□□ 2.11
Ift140E9PY46 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ift140E9PY46 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ift140E9PY46 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ift140E9PY46 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC28.25■■■□□ 2.11
Ift140E9PY46 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC28.25■■■□□ 2.11
Ift140E9PY46 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC28.25■■■□□ 2.11
Ift140E9PY46 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC28.25■■■□□ 2.11
Ift140E9PY46 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms