Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a3E9PWQ3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Gm27397-201ENSMUST00000184997 107 ntBASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.96■□□□□ 0.47
Col6a3E9PWQ3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col6a3E9PWQ3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Col6a3E9PWQ3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.96■□□□□ 0.46
Col6a3E9PWQ3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Gm5745-201ENSMUST00000183748 313 ntBASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a3E9PWQ3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44357-201ENSMUST00000195897 142 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm19658-201ENSMUST00000196231 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44367-201ENSMUST00000196836 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44350-201ENSMUST00000197197 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44390-201ENSMUST00000197533 144 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44313-201ENSMUST00000198018 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44486-201ENSMUST00000198508 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44454-201ENSMUST00000198541 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44314-201ENSMUST00000199263 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44394-201ENSMUST00000199558 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44484-201ENSMUST00000199873 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44466-201ENSMUST00000200264 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm44359-201ENSMUST00000200671 138 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a3E9PWQ3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Gm7862-201ENSMUST00000121461 292 ntBASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col6a3E9PWQ3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Chchd1-203ENSMUST00000224633 557 ntBASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col6a3E9PWQ3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.91■□□□□ 0.46
Col6a3E9PWQ3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms