Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm28043E0CXC2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm28043E0CXC2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm28043E0CXC2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Gm27405-201ENSMUST00000184201 112 ntBASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm28043E0CXC2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm28043E0CXC2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28043E0CXC2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28043E0CXC2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28043E0CXC2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.83■□□□□ 0.45
Gm28043E0CXC2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gm28043E0CXC2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28043E0CXC2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28043E0CXC2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gm28043E0CXC2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28043E0CXC2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms