Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.5□□□□□ -0.25
Col6a5A6H584 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.5□□□□□ -0.25
Col6a5A6H584 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a5A6H584 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col6a5A6H584 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a5A6H584 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.49□□□□□ -0.25
Col6a5A6H584 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Gm26039-201ENSMUST00000158152 144 ntBASIC13.48□□□□□ -0.25
Col6a5A6H584 Gm8000-201ENSMUST00000188378 592 ntBASIC13.48□□□□□ -0.25
Col6a5A6H584 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a5A6H584 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.48□□□□□ -0.25
Col6a5A6H584 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a5A6H584 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a5A6H584 Gm12895-201ENSMUST00000122214 226 ntBASIC13.48□□□□□ -0.25
Col6a5A6H584 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a5A6H584 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.48□□□□□ -0.25
Col6a5A6H584 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a5A6H584 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm37722-201ENSMUST00000193757 208 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a5A6H584 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col6a5A6H584 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm12350-201ENSMUST00000121208 462 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm1401-201ENSMUST00000122048 772 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm10052-201ENSMUST00000168019 960 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm10060-201ENSMUST00000212002 111 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 Gm7729-201ENSMUST00000050143 801 ntBASIC13.47□□□□□ -0.25
Col6a5A6H584 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a5A6H584 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Col6a5A6H584 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a5A6H584 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a5A6H584 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a5A6H584 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Col6a5A6H584 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.46□□□□□ -0.25
Col6a5A6H584 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a5A6H584 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Col6a5A6H584 Gm15467-201ENSMUST00000120582 445 ntBASIC13.46□□□□□ -0.25
Col6a5A6H584 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Col6a5A6H584 Gm14822-201ENSMUST00000122247 291 ntBASIC13.46□□□□□ -0.25
Col6a5A6H584 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.46□□□□□ -0.25
Col6a5A6H584 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.46□□□□□ -0.25
Col6a5A6H584 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col6a5A6H584 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a5A6H584 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.46□□□□□ -0.25
Col6a5A6H584 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a5A6H584 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.46□□□□□ -0.26
Col6a5A6H584 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col6a5A6H584 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a5A6H584 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.46□□□□□ -0.26
Col6a5A6H584 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a5A6H584 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Col6a5A6H584 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a5A6H584 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a5A6H584 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.45□□□□□ -0.26
Col6a5A6H584 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms