Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Gm17807-201ENSMUST00000186869 298 ntBASIC14.99□□□□□ -0.01
Col6a4A2AX52 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a4A2AX52 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.98□□□□□ -0.01
Col6a4A2AX52 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col6a4A2AX52 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a4A2AX52 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.96□□□□□ -0.01
Col6a4A2AX52 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a4A2AX52 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a4A2AX52 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a4A2AX52 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a4A2AX52 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Col6a4A2AX52 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a4A2AX52 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a4A2AX52 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a4A2AX52 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.95□□□□□ -0.02
Col6a4A2AX52 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a4A2AX52 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a4A2AX52 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col6a4A2AX52 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a4A2AX52 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.93□□□□□ -0.02
Col6a4A2AX52 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col6a4A2AX52 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.93□□□□□ -0.02
Col6a4A2AX52 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.93□□□□□ -0.02
Col6a4A2AX52 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms