Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-1A0N8R0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-1A0N8R0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav12d-1A0N8R0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Gm13234-201ENSMUST00000120010 747 ntBASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-1A0N8R0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-1A0N8R0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms