Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv17A0A140T8P8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv17A0A140T8P8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv17A0A140T8P8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Gm13148-201ENSMUST00000118892 745 ntBASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Gm22325-201ENSMUST00000158904 308 ntBASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv17A0A140T8P8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms