Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Frmpd3A0A140LIW3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Birc2-201ENSMUST00000054878 378 ntBASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Mir8098-201ENSMUST00000184011 137 ntBASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.31■■□□□ 1
Frmpd3A0A140LIW3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Gm13884-201ENSMUST00000118103 829 ntBASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Frmpd3A0A140LIW3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
Frmpd3A0A140LIW3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Frmpd3A0A140LIW3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Frmpd3A0A140LIW3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Gm29791-202ENSMUST00000207888 369 ntBASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Frmpd3A0A140LIW3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Gm26039-201ENSMUST00000158152 144 ntBASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Frmpd3A0A140LIW3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms