Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc194A0A140LIT1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.75■□□□□ 0.43
Ccdc194A0A140LIT1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc194A0A140LIT1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc194A0A140LIT1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc194A0A140LIT1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc194A0A140LIT1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc194A0A140LIT1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc194A0A140LIT1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc194A0A140LIT1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc194A0A140LIT1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc194A0A140LIT1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc194A0A140LIT1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc194A0A140LIT1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms