Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm9847-201ENSMUST00000052528 599 ntBASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9d-4A0A0G2JG37 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9d-4A0A0G2JG37 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav9d-4A0A0G2JG37 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms