Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav19A0A0B4J1K4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav19A0A0B4J1K4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav19A0A0B4J1K4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav19A0A0B4J1K4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav19A0A0B4J1K4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav19A0A0B4J1K4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav19A0A0B4J1K4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Gm6139-201ENSMUST00000079261 882 ntBASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav19A0A0B4J1K4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms