Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm38205-201ENSMUST00000192243 258 ntBASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Gm8493-201ENSMUST00000196881 489 ntBASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav11A0A0B4J1J9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav11A0A0B4J1J9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.25□□□□□ -0.45
Trav11A0A0B4J1J9 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav11A0A0B4J1J9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms