Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BC053393A0A0B4J1F6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BC053393A0A0B4J1F6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
BC053393A0A0B4J1F6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BC053393A0A0B4J1F6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BC053393A0A0B4J1F6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BC053393A0A0B4J1F6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Gm42778-201ENSMUST00000199644 553 ntBASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BC053393A0A0B4J1F6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms