Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm11643-201ENSMUST00000119578 864 ntBASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Trmt13-210ENSMUST00000198454 880 ntBASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh7A0A0A6YY83 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm18666-201ENSMUST00000190039 958 ntBASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh7A0A0A6YY83 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh7A0A0A6YY83 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh7A0A0A6YY83 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh7A0A0A6YY83 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdh7A0A0A6YY83 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh7A0A0A6YY83 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdh7A0A0A6YY83 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh7A0A0A6YY83 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.32■□□□□ 0.52
Pcdh7A0A0A6YY83 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh7A0A0A6YY83 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms