Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Gm4968-201ENSMUST00000071458 858 ntBASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv21A0A0A6YX06 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Gm10418-201ENSMUST00000100943 576 ntBASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Mir2861-201ENSMUST00000175539 82 ntBASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv21A0A0A6YX06 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv21A0A0A6YX06 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Gm29791-202ENSMUST00000207888 369 ntBASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Mtag2-201ENSMUST00000058665 714 ntBASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv21A0A0A6YX06 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv21A0A0A6YX06 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms