Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbc1A0A0A6YWV4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbc1A0A0A6YWV4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbc1A0A0A6YWV4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm11249-201ENSMUST00000117071 859 ntBASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm8520-201ENSMUST00000186517 868 ntBASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.34■□□□□ 0.21
Trbc1A0A0A6YWV4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbc1A0A0A6YWV4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbc1A0A0A6YWV4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trbc1A0A0A6YWV4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trbc1A0A0A6YWV4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbc1A0A0A6YWV4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbc1A0A0A6YWV4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm11927-201ENSMUST00000118472 759 ntBASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Zfp783-201ENSMUST00000095946 670 ntBASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbc1A0A0A6YWV4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbc1A0A0A6YWV4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm38285-201ENSMUST00000192928 922 ntBASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trbc1A0A0A6YWV4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms