Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.72□□□□□ -0.21
Trav21-dv12A0A075B6C4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav21-dv12A0A075B6C4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav21-dv12A0A075B6C4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav21-dv12A0A075B6C4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav21-dv12A0A075B6C4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm18284-201ENSMUST00000172604 624 ntBASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm42569-201ENSMUST00000200539 472 ntBASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav21-dv12A0A075B6C4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm26571-201ENSMUST00000181399 666 ntBASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gm6365-201ENSMUST00000054711 744 ntBASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav21-dv12A0A075B6C4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav21-dv12A0A075B6C4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms