Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav12d-3A0A075B6A4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12d-3A0A075B6A4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12d-3A0A075B6A4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12d-3A0A075B6A4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm12366-201ENSMUST00000121722 873 ntBASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm5786-201ENSMUST00000085368 882 ntBASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12d-3A0A075B6A4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav12d-3A0A075B6A4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm10232-201ENSMUST00000089221 720 ntBASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav12d-3A0A075B6A4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm7860-201ENSMUST00000121190 879 ntBASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12d-3A0A075B6A4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Gm13238-201ENSMUST00000117655 780 ntBASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12d-3A0A075B6A4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms