Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-4A0A075B654 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Gm27502-201ENSMUST00000183495 199 ntBASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Gm8969-201ENSMUST00000199694 526 ntBASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-4A0A075B654 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav3-4A0A075B654 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav3-4A0A075B654 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms