Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-4-dv10A0A075B651 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Idnk-204ENSMUST00000226010 1898 ntBASIC13.91□□□□□ -0.18
Trav4-4-dv10A0A075B651 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-4-dv10A0A075B651 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.19
Trav4-4-dv10A0A075B651 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav4-4-dv10A0A075B651 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-4-dv10A0A075B651 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Gm13234-201ENSMUST00000120010 747 ntBASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-4-dv10A0A075B651 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms