Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Gm11249-201ENSMUST00000117071 859 ntBASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13-1A0A075B644 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Gm22325-201ENSMUST00000158904 308 ntBASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13-1A0A075B644 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Grk6-206ENSMUST00000224995 2971 ntBASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 BC021767-201ENSMUST00000126387 1716 ntBASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13-1A0A075B644 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav13-1A0A075B644 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav13-1A0A075B644 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Gm5643-201ENSMUST00000117081 966 ntBASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Gm13158-201ENSMUST00000122007 736 ntBASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13-1A0A075B644 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav13-1A0A075B644 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms