Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm26524-201ENSMUST00000192339 390 ntBASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-7-dv9A0A075B639 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm12933-201ENSMUST00000120203 872 ntBASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Flg-201ENSMUST00000050758 1488 ntBASIC15.81■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rab3c-203ENSMUST00000224180 967 ntBASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-7-dv9A0A075B639 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trav6-7-dv9A0A075B639 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm10418-201ENSMUST00000100943 576 ntBASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Zfp783-201ENSMUST00000095946 670 ntBASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-7-dv9A0A075B639 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Gm13148-201ENSMUST00000118892 745 ntBASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-7-dv9A0A075B639 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.77■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-7-dv9A0A075B639 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms