Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Gm43137-201ENSMUST00000198052 594 ntBASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav4-2A0A075B638 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Gm38205-201ENSMUST00000192243 258 ntBASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav4-2A0A075B638 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4-2A0A075B638 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4-2A0A075B638 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms