Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav8n-2A0A075B633 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Gm27741-201ENSMUST00000185060 237 ntBASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav8n-2A0A075B633 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav8n-2A0A075B633 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Gm13474-201ENSMUST00000122466 815 ntBASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav8n-2A0A075B633 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8n-2A0A075B633 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8n-2A0A075B633 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8n-2A0A075B633 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms