Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9n-4A0A075B631 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9n-4A0A075B631 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Nespas-201ENSMUST00000143738 1083 ntBASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Gm10493-201ENSMUST00000097270 612 ntBASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav9n-4A0A075B631 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9n-4A0A075B631 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9n-4A0A075B631 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9n-4A0A075B631 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Gm6420-201ENSMUST00000193885 723 ntBASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-4A0A075B631 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Tgds-204ENSMUST00000228543 1594 ntBASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-4A0A075B631 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Gm18671-201ENSMUST00000214826 683 ntBASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav9n-4A0A075B631 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9n-4A0A075B631 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms