Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4d-3A0A075B625 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4d-3A0A075B625 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav4d-3A0A075B625 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Trav4d-3A0A075B625 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4d-3A0A075B625 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4d-3A0A075B625 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4d-3A0A075B625 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4d-3A0A075B625 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4d-3A0A075B625 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4d-3A0A075B625 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav4d-3A0A075B625 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms