Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm45417-201ENSMUST00000209533 758 ntBASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm13534-201ENSMUST00000121169 513 ntBASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm22325-201ENSMUST00000158904 308 ntBASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15d-1-dv6d-1A0A075B624 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms