Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav16d-dv11A0A075B617 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Tgds-204ENSMUST00000228543 1594 ntBASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm22238-201ENSMUST00000175222 88 ntBASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm15820-201ENSMUST00000201566 728 ntBASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav16d-dv11A0A075B617 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16d-dv11A0A075B617 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16d-dv11A0A075B617 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav16d-dv11A0A075B617 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16d-dv11A0A075B617 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms