Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Gm45417-201ENSMUST00000209533 758 ntBASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-6A0A075B603 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm40848-201ENSMUST00000221998 324 ntBASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-6A0A075B603 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Gm43017-201ENSMUST00000198296 752 ntBASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-6A0A075B603 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-6A0A075B603 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Gm43060-201ENSMUST00000200621 289 ntBASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-6A0A075B603 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms