Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv4A0A075B5I2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbv4A0A075B5I2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv4A0A075B5I2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Gm4968-201ENSMUST00000071458 858 ntBASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv4A0A075B5I2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Dio3-201ENSMUST00000097228 1449 ntBASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv4A0A075B5I2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Trbv4A0A075B5I2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms