Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm14918-201ENSMUST00000118153 268 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm8644-201ENSMUST00000118619 596 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm2735-201ENSMUST00000136133 277 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm23222-201ENSMUST00000158117 76 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm18808-201ENSMUST00000173316 462 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm29552-201ENSMUST00000190548 660 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm3933-201ENSMUST00000195391 439 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Mir6375-201ENSMUST00000197176 95 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm45189-201ENSMUST00000208567 363 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm19441-201ENSMUST00000221545 330 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim39Q9ESN2 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm22470-201ENSMUST00000104117 130 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm11386-201ENSMUST00000117761 347 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm11344-201ENSMUST00000122011 335 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm26182-201ENSMUST00000157688 116 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm15946-201ENSMUST00000160654 423 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm24923-201ENSMUST00000178201 88 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm27428-201ENSMUST00000184289 110 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Mir7029-201ENSMUST00000184777 61 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm5575-201ENSMUST00000190879 398 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Gm42573-201ENSMUST00000202327 478 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.51□□□□□ -1.37
Trim39Q9ESN2 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms