Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm24986-201ENSMUST00000104452 132 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm15142-201ENSMUST00000121013 856 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm10913-201ENSMUST00000133732 463 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm25451-201ENSMUST00000177832 121 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm26898-201ENSMUST00000181678 384 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm27373-201ENSMUST00000184017 184 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm44431-201ENSMUST00000203500 413 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm44923-201ENSMUST00000206673 85 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 AC140299.2-201ENSMUST00000219546 1969 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 AV026068-229ENSMUST00000225516 595 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 AC138718.1-201ENSMUST00000225947 1009 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm20900-201ENSMUST00000078729 472 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Pcdhb7Q8CDY9 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm42661-201ENSMUST00000202364 1442 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm42561-201ENSMUST00000202563 1442 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm20430-201ENSMUST00000172474 207 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm23164-201ENSMUST00000175084 111 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm27019-201ENSMUST00000183056 404 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm42573-201ENSMUST00000202327 478 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm3148-201ENSMUST00000203594 612 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm5586-201ENSMUST00000206264 795 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Gm18891-201ENSMUST00000216734 1087 ntBASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Pcdhb7Q8CDY9 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms