Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Trim47Q8C0E3 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim47Q8C0E3 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.59□□□□□ -1.2
Trim47Q8C0E3 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Trim47Q8C0E3 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm25877-201ENSMUST00000104326 129 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm14365-201ENSMUST00000117535 587 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm12935-201ENSMUST00000119352 246 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm14847-201ENSMUST00000121978 519 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm23756-201ENSMUST00000157582 114 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm22076-201ENSMUST00000158601 84 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm25363-201ENSMUST00000158850 245 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm9597-201ENSMUST00000171913 602 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm22690-201ENSMUST00000175054 110 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm22132-201ENSMUST00000175316 100 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm5871-201ENSMUST00000176461 718 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Mir8097-201ENSMUST00000185150 119 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm17824-201ENSMUST00000197690 805 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm5711-201ENSMUST00000197896 421 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm43144-201ENSMUST00000198256 485 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm9245-201ENSMUST00000200528 983 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm45387-201ENSMUST00000209792 632 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 CT009733.1-201ENSMUST00000225322 425 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 CT025552.2-201ENSMUST00000225497 317 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm29486-201ENSMUST00000088648 372 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm37124-201ENSMUST00000192140 1992 ntBASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trim47Q8C0E3 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm12573-201ENSMUST00000118158 286 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm14001-201ENSMUST00000118847 247 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm12322-201ENSMUST00000121605 389 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm12175-201ENSMUST00000122081 345 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm22733-201ENSMUST00000158094 91 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm17142-201ENSMUST00000164933 645 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm22621-201ENSMUST00000179678 74 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm27803-201ENSMUST00000183763 119 ntBASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim47Q8C0E3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms