Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Gm5830-201ENSMUST00000049117 443 ntBASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Mir298-201ENSMUST00000083476 82 ntBASIC5.79□□□□□ -1.48
Trim43aQ3TL54 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim43aQ3TL54 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim43aQ3TL54 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm11105-201ENSMUST00000112781 478 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm14985-201ENSMUST00000118693 786 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm4342-201ENSMUST00000118982 367 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm13013-201ENSMUST00000119087 523 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm12413-201ENSMUST00000121508 312 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm15152-201ENSMUST00000121540 394 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm21772-201ENSMUST00000169213 478 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm17126-201ENSMUST00000172276 523 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm38131-201ENSMUST00000192449 430 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm8911-201ENSMUST00000213986 652 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm46223-201ENSMUST00000215196 675 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim43aQ3TL54 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm16394-201ENSMUST00000117289 675 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm15741-201ENSMUST00000119401 754 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm25459-201ENSMUST00000157953 114 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm22724-201ENSMUST00000158091 127 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm24731-201ENSMUST00000158227 131 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm43444-201ENSMUST00000198123 291 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm8719-201ENSMUST00000203602 534 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 AV026068-237ENSMUST00000226075 572 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Snord59a-201ENSMUST00000082844 74 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim43aQ3TL54 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms