Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm12814-201ENSMUST00000117091 846 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm12131-201ENSMUST00000117479 359 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm13428-201ENSMUST00000117540 365 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm14529-201ENSMUST00000117894 406 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm14805-201ENSMUST00000120172 340 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm24635-201ENSMUST00000122712 128 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm22599-201ENSMUST00000157597 132 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm20615-201ENSMUST00000177503 705 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm21754-201ENSMUST00000177550 479 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm5974-201ENSMUST00000181607 986 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm7745-201ENSMUST00000182235 973 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm27905-201ENSMUST00000184005 207 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm37689-201ENSMUST00000193139 275 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm37889-201ENSMUST00000194174 251 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm43354-201ENSMUST00000196862 346 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm43493-201ENSMUST00000199837 202 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm7463-201ENSMUST00000201541 547 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm17849-201ENSMUST00000219788 853 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col8a1Q00780 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm14442-201ENSMUST00000119690 1736 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.57□□□□□ -1.52
Col8a1Q00780 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.57□□□□□ -1.52
Col8a1Q00780 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col8a1Q00780 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col8a1Q00780 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col8a1Q00780 Gm25795-201ENSMUST00000104421 132 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms