Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm23631-201ENSMUST00000175291 123 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm26318-201ENSMUST00000176507 96 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm27754-201ENSMUST00000183340 126 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm18215-201ENSMUST00000204429 798 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm44673-201ENSMUST00000205692 996 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm44580-201ENSMUST00000206333 877 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Anxa13-202ENSMUST00000227274 1201 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx3-1P97436 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC4.8□□□□□ -1.64
Nkx3-1P97436 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Nkx3-1P97436 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm16179-201ENSMUST00000120685 373 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm11805-201ENSMUST00000121238 600 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm12685-201ENSMUST00000121702 214 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm23211-201ENSMUST00000122717 308 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm10319-202ENSMUST00000159439 846 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm23806-201ENSMUST00000175157 109 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm22411-201ENSMUST00000175462 126 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm22002-201ENSMUST00000175622 125 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm33952-201ENSMUST00000197795 408 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm21461-201ENSMUST00000200382 863 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm44582-201ENSMUST00000209125 445 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm23686-201ENSMUST00000083241 164 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm25187-201ENSMUST00000083906 133 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm37087-201ENSMUST00000192966 3309 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm37752-201ENSMUST00000193494 3309 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx3-1P97436 Gm37249-201ENSMUST00000195185 2869 ntBASIC4.79□□□□□ -1.64
Nkx3-1P97436 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Nkx3-1P97436 AC154734.1-201ENSMUST00000219957 2141 ntBASIC4.78□□□□□ -1.64
Nkx3-1P97436 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms