Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm6650-201ENSMUST00000166710 614 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm2497-201ENSMUST00000189539 601 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm8823-201ENSMUST00000193158 433 ntBASIC5.5□□□□□ -1.53
HttP42859 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.5□□□□□ -1.53
HttP42859 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.5□□□□□ -1.53
HttP42859 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HttP42859 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC5.5□□□□□ -1.53
HttP42859 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.5□□□□□ -1.53
HttP42859 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HttP42859 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.5□□□□□ -1.53
HttP42859 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HttP42859 AC129208.1-201ENSMUST00000227474 2906 ntBASIC5.5□□□□□ -1.53
HttP42859 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HttP42859 Gm25419-201ENSMUST00000104215 191 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm11270-201ENSMUST00000117685 471 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm12717-201ENSMUST00000118427 983 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm23279-201ENSMUST00000157912 97 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.5□□□□□ -1.53
HttP42859 Mir6412-201ENSMUST00000184477 97 ntBASIC5.5□□□□□ -1.53
HttP42859 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HttP42859 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.5□□□□□ -1.53
HttP42859 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.5□□□□□ -1.53
HttP42859 Smc5-206ENSMUST00000226111 3265 ntBASIC5.5□□□□□ -1.53
HttP42859 Prkaa1-202ENSMUST00000228218 4618 ntBASIC5.5□□□□□ -1.53
HttP42859 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
HttP42859 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HttP42859 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.5□□□□□ -1.53
HttP42859 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HttP42859 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm44852-201ENSMUST00000207950 369 ntBASIC5.5□□□□□ -1.53
HttP42859 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HttP42859 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.5□□□□□ -1.53
HttP42859 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HttP42859 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HttP42859 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HttP42859 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.5□□□□□ -1.53
HttP42859 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.5□□□□□ -1.53
HttP42859 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HttP42859 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.49□□□□□ -1.53
HttP42859 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Gm23014-201ENSMUST00000104144 130 ntBASIC5.49□□□□□ -1.53
HttP42859 Gm23485-201ENSMUST00000104181 155 ntBASIC5.49□□□□□ -1.53
HttP42859 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HttP42859 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.49□□□□□ -1.53
HttP42859 Gm33626-201ENSMUST00000206790 828 ntBASIC5.49□□□□□ -1.53
HttP42859 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.49□□□□□ -1.53
HttP42859 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
HttP42859 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Gm22456-201ENSMUST00000082578 125 ntBASIC5.49□□□□□ -1.53
HttP42859 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HttP42859 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.49□□□□□ -1.53
HttP42859 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.49□□□□□ -1.53
HttP42859 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.49□□□□□ -1.53
HttP42859 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.49□□□□□ -1.53
HttP42859 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Gm15206-201ENSMUST00000119143 454 ntBASIC5.49□□□□□ -1.53
HttP42859 Gm15603-201ENSMUST00000119252 492 ntBASIC5.49□□□□□ -1.53
HttP42859 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.49□□□□□ -1.53
HttP42859 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.49□□□□□ -1.53
HttP42859 Gm2645-201ENSMUST00000223516 547 ntBASIC5.49□□□□□ -1.53
HttP42859 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.49□□□□□ -1.53
HttP42859 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HttP42859 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HttP42859 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.49□□□□□ -1.53
HttP42859 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HttP42859 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HttP42859 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HttP42859 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Gm13367-201ENSMUST00000119955 796 ntBASIC5.48□□□□□ -1.53
HttP42859 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.48□□□□□ -1.53
HttP42859 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HttP42859 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HttP42859 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HttP42859 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms