Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Col18a1P39061 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.57□□□□□ -1.2
Col18a1P39061 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Col18a1P39061 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC7.57□□□□□ -1.2
Col18a1P39061 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col18a1P39061 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm14382-201ENSMUST00000117374 437 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm22817-201ENSMUST00000157448 356 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Mir3473a-201ENSMUST00000175011 78 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Trdv3-201ENSMUST00000198551 309 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Col18a1P39061 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 AC154724.1-201ENSMUST00000225782 821 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
Col18a1P39061 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm45262-201ENSMUST00000209917 1463 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 AC165260.6-205ENSMUST00000224190 9762 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col18a1P39061 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Col18a1P39061 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm19552-201ENSMUST00000194744 2833 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC7.56□□□□□ -1.2
Col18a1P39061 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col18a1P39061 Gm19029-201ENSMUST00000189923 564 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Gm43367-201ENSMUST00000199986 625 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Gm43919-201ENSMUST00000204303 364 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Gm44615-201ENSMUST00000206548 358 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 CT954323.2-201ENSMUST00000222056 213 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Gm25586-201ENSMUST00000082499 112 ntBASIC7.56□□□□□ -1.2
Col18a1P39061 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.56□□□□□ -1.2
Col18a1P39061 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Col18a1P39061 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col18a1P39061 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col18a1P39061 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col18a1P39061 Gm43490-201ENSMUST00000197593 2652 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Gm13615-201ENSMUST00000120242 1612 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col18a1P39061 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col18a1P39061 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.55□□□□□ -1.2
Col18a1P39061 Gm15168-201ENSMUST00000121057 316 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Mir3104-201ENSMUST00000174911 63 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col18a1P39061 Gm28661-201ENSMUST00000188231 681 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Gm20954-201ENSMUST00000189078 644 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Gm28443-201ENSMUST00000189081 698 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Gm44392-201ENSMUST00000196758 115 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC7.55□□□□□ -1.2
Col18a1P39061 Gm29785-201ENSMUST00000217033 383 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC7.55□□□□□ -1.2
Col18a1P39061 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col18a1P39061 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col18a1P39061 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col18a1P39061 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC7.55□□□□□ -1.2
Col18a1P39061 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
Col18a1P39061 AC154734.1-201ENSMUST00000219957 2141 ntBASIC7.55□□□□□ -1.2
Col18a1P39061 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col18a1P39061 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col18a1P39061 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Col18a1P39061 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col18a1P39061 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm44235-201ENSMUST00000204312 3058 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col18a1P39061 Gm42540-201ENSMUST00000200319 2008 ntBASIC7.54□□□□□ -1.2
Col18a1P39061 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms